BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009D08LP1|AL426028
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1342 1592 0.0
>3x_Contig1342
Length = 7422
Score = 1592 bits (799), Expect = 0.0
Identities = 805/811 (99%)
Strand = Plus / Minus
Query: 1 aaattacatccaacaaacgttgacgtttggatatcatgtgctaaatatgaatacgaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1914 aaattacatccaacaaacgttgacgtttggatatcatgtgctaaatatgaatacgaattg 1855
Query: 61 cacgcaaacttcaagagctgtagaaatgtttttcaaactggtcttagatttaatccagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1854 cacgcaaacttcaagagctgtagaaatgtttttcaaactggtcttagatttaatccagat 1795
Query: 121 gcttctaaactctggtacgagtacgttaaattcgaactgaatttcgtgacaaaattgtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1794 gcttctaaactctggtacgagtacgttaaattcgaactgaatttcgtgacaaaattgtta 1735
Query: 181 aatagaagaaaagtgatgaatttaatcaacgaaagggaacaagagcyagatatgcyacaa 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 1734 aatagaagaaaagtgatgaatttaatcaacgaaagggaacaagagctagatatgctacaa 1675
Query: 241 cagcaagaggaaggaagaaactccagtwatgtaacaggtctggaagaaactgcagatgac 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1674 cagcaagaggaaggaagaaactccagtaatgtaacaggtctggaagaaactgcagatgac 1615
Query: 301 gaagcatactttgacaaagacggaattcaacttccaagtactggtgacaagatgaaagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1614 gaagcatactttgacaaagacggaattcaacttccaagtactggtgacaagatgaaagat 1555
Query: 361 aaactaaacgagttaccagaagccgatatgaatatgcytggatcagaagaaactaatcca 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1554 aaactaaacgagttaccagaagccgatatgaatatgcttggatcagaagaaactaatcca 1495
Query: 421 gcactacgtggtgatgtcgcattggttatattcgatatcgcaatgaagaatctgggcaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1494 gcactacgtggtgatgtcgcattggttatattcgatatcgcaatgaagaatctgggcaca 1435
Query: 481 tcttttgtcaagaaacatcaaggatactacgccgttaccaattcgcaagtcgatgaagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1434 tcttttgtcaagaaacatcaaggatactacgccgttaccaattcgcaagtcgatgaagag 1375
Query: 541 ctcagcagaaacgttatgtcctacctgtttgatagatgcctcgagtatatcaacttattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1374 ctcagcagaaacgttatgtcctacctgtttgatagatgcctcgagtatatcaacttattt 1315
Query: 601 tcggaatttcaagatttaaaaagagaatatctgataaatcacgtattgcaatggctaaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 tcggaatttcaagatttaaaaagagaatatctgataaatcacgtattgcaatggctaaag 1255
Query: 661 gacgaacattataatatttcccttgagaaaagtatgccagaaaaatatgtkgaattatta 720
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1254 gacgaacattataatatttcccttgagaaaagtatgccagaaaaatatgtggaattatta 1195
Query: 721 ttgcatgatgttacattaaatatcaaattcatgcctgccggcgaattaaacatcgacagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1194 ttgcatgatgttacattaaatatcaaattcatgcctgccggcgaattaaacatcgacagt 1135
Query: 781 ytccaattgtccttcaaaaagtattctgcat 811
||||||||||||||||||||||||||||||
Sbjct: 1134 ctccaattgtccttcaaaaagtattctgcat 1104
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6441
Number of Sequences: 1807
Number of extensions: 6441
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)